CD29792

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD29792

CD29792

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Parn

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• poly(A)-specific ribonuclease (deadenylation nuclease)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• polyadenylate-specific ribonuclease
• poly(A)-specific ribonuclease PARN
• poly(A)-specific ribonuclease (deadenylation nuclease)

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 1200003I18Rik
• DAN

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/74108

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• poly(A)-specific ribonuclease (deadenylation nuclease)
  http://metadb.riken.jp/db/mgi_rdf/MGI:1921358

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_028761

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000022685

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.182350

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604212

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Per. Nilsson, et.al., A multifunctional RNA recognition motif in poly(A)-specific ribonuclease with cap and poly(A) binding properties., The Journal of biological chemistry, 2007, 282
  http://rdf.ncbi.nlm.nih.gov/pubmed/17785461
• Takashi. Nagata, et.al., The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition., Nucleic acids research, 2008, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/18641416
• Mousheng. Wu, et.al., Structural basis of m(7)GpppG binding to poly(A)-specific ribonuclease., Structure (London, England : 1993), 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/19217398
• Fabienne. Mauxion, et.al., The BTG2 protein is a general activator of mRNA deadenylation., The EMBO journal, 2008, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/18337750

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein kinase binding
  http://purl.obolibrary.org/obo/GO_0019901
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• exonuclease activity
  http://purl.obolibrary.org/obo/GO_0004527
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• poly(A)-specific ribonuclease activity
  http://purl.obolibrary.org/obo/GO_0004535
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• nuclear-transcribed mRNA poly(A) tail shortening
  http://purl.obolibrary.org/obo/GO_0000289
• nuclease activity
  http://purl.obolibrary.org/obo/GO_0004518
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• mRNA catabolic process
  http://purl.obolibrary.org/obo/GO_0006402
• nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  http://purl.obolibrary.org/obo/GO_0000184
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03018

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• RNA degradation