CD39305

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD39305

CD39305

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Vars

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• valyl-tRNA synthetase

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• valine--tRNA ligase
• protein G7a
• valRS
• valyl-tRNA synthetase

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Bat-6
• D17H6S56E
• Bat6
• G7a
• Vars2

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/22321

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• valyl-tRNA synthetase
  http://metadb.riken.jp/db/mgi_rdf/MGI:90675

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011690

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000007029

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.28420

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=192150

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• D L. Gasser, et.al., P1 and cosmid clones define the organization of 280 kb of the mouse H-2 complex containing the Cps-1 and Hsp70 loci., Immunogenetics, 1994, 39
  http://rdf.ncbi.nlm.nih.gov/pubmed/7993390
• R J. Fijneman, et.al., A susceptibility gene for alveolar lung tumors in the mouse maps between Hsp70.3 and G7 within the H2 complex., Immunogenetics, 1995, 41
  http://rdf.ncbi.nlm.nih.gov/pubmed/7806281
• Piero. Carninci, et.al., Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia., Genome research, 2003, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/12819125
• Vamsi K. Mootha, et.al., Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria., Cell, 2003, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/14651853
• T. Lund, et.al., RFLP analysis of the MHC class III region defines unique haplotypes for the non-obese diabetic, cataract Shionogi and the non-obese non-diabetic mouse strains., Diabetologia, 1993, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/8104833
• M. van Kooij, et.al., Genotype versus phenotype: conflicting results in mapping a lung tumor susceptibility locus to the G7c recombination interval in the mouse MHC class III region., Immunogenetics, 2001, 53
  http://rdf.ncbi.nlm.nih.gov/pubmed/11797099
• M. Snoek, et.al., New microsatellite size variants as markers for a cross-over hotspot in the C4-H-2D region., Mammalian genome : official journal of the International Mammalian Genome Society, 1994, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/8199408
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• W P. Lafuse, et.al., PFGE mapping and RFLP analysis of the S/D region of the mouse H-2 complex., Immunogenetics, 1992, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/1351875
• Tao. Xie, et.al., Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse., Genome research, 2003, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/14656967

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524
• translation
  http://purl.obolibrary.org/obo/GO_0006412
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• tRNA aminoacylation for protein translation
  http://purl.obolibrary.org/obo/GO_0006418
• valyl-tRNA aminoacylation
  http://purl.obolibrary.org/obo/GO_0006438
• mitochondrion
  http://purl.obolibrary.org/obo/GO_0005739
• valine-tRNA ligase activity
  http://purl.obolibrary.org/obo/GO_0004832
• aminoacyl-tRNA ligase activity
  http://purl.obolibrary.org/obo/GO_0004812
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• ligase activity
  http://purl.obolibrary.org/obo/GO_0016874
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00970

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Aminoacyl-tRNA biosynthesis