CD40803

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD40803

CD40803

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Thbs2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• thrombospondin 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• thrombospondin 2
• thrombospondin-2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Thrombospondin-2
• TSP2
• Thbs-2

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/21826

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• thrombospondin 2
  http://metadb.riken.jp/db/mgi_rdf/MGI:98738

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011581

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000023885

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.26688

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=188061

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• P. Bornstein, et.al., A second, expressed thrombospondin gene (Thbs2) exists in the mouse genome., The Journal of biological chemistry, 1991, 266
  http://rdf.ncbi.nlm.nih.gov/pubmed/1712771
• Jianguang. Du, et.al., O-fucosylation of thrombospondin type 1 repeats restricts epithelial to mesenchymal transition (EMT) and maintains epiblast pluripotency during mouse gastrulation., Developmental biology, 2010, 346
  http://rdf.ncbi.nlm.nih.gov/pubmed/20637190
• H. Himmelbauer, et.al., High-resolution genetic analysis of a deletion on mouse chromosome 17 extending over the fused, tufted, and homeobox Nkx2-5 loci., Mammalian genome : official journal of the International Mammalian Genome Society, 1994, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/7894168
• Cagla. Eroglu, et.al., Gabapentin receptor alpha2delta-1 is a neuronal thrombospondin receptor responsible for excitatory CNS synaptogenesis., Cell, 2009, 139
  http://rdf.ncbi.nlm.nih.gov/pubmed/19818485
• P. Bornstein, et.al., A second thrombospondin gene in the mouse is similar in organization to thrombospondin 1 but does not respond to serum., Proceedings of the National Academy of Sciences of the United States of America, 1991, 88
  http://rdf.ncbi.nlm.nih.gov/pubmed/1924325
• Melissa. Swinnen, et.al., Absence of thrombospondin-2 causes age-related dilated cardiomyopathy., Circulation, 2009, 120
  http://rdf.ncbi.nlm.nih.gov/pubmed/19805649
• Z. Trachtulec, et.al., Physical map of mouse chromosome 17 in the region relevant for positional cloning of the Hybrid sterility 1 gene., Genomics, 1994, 23
  http://rdf.ncbi.nlm.nih.gov/pubmed/7829061
• Hailu S. Shitaye, et.al., Thrombospondin-2 is an endogenous adipocyte inhibitor., Matrix biology : journal of the International Society for Matrix Biology, 2010, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/20561899
• C D. Laherty, et.al., Characterization of mouse thrombospondin 2 sequence and expression during cell growth and development., The Journal of biological chemistry, 1992, 267
  http://rdf.ncbi.nlm.nih.gov/pubmed/1371115
• Pablo. Villavicencio-Lorini, et.al., Homeobox genes d11-d13 and a13 control mouse autopod cortical bone and joint formation., The Journal of clinical investigation, 2010, 120
  http://rdf.ncbi.nlm.nih.gov/pubmed/20458143

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• structural molecule activity
  http://purl.obolibrary.org/obo/GO_0005198
• extracellular matrix
  http://purl.obolibrary.org/obo/GO_0031012
• extracellular region
  http://purl.obolibrary.org/obo/GO_0005576
• cell adhesion
  http://purl.obolibrary.org/obo/GO_0007155
• negative regulation of angiogenesis
  http://purl.obolibrary.org/obo/GO_0016525
• calcium ion binding
  http://purl.obolibrary.org/obo/GO_0005509
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• positive regulation of synapse assembly
  http://purl.obolibrary.org/obo/GO_0051965
• basement membrane
  http://purl.obolibrary.org/obo/GO_0005604
• heparin binding
  http://purl.obolibrary.org/obo/GO_0008201

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04350
• http://www.genome.jp/dbget-bin/www_bget?map05144
• http://www.genome.jp/dbget-bin/www_bget?map04145
• http://www.genome.jp/dbget-bin/www_bget?map04512
• http://www.genome.jp/dbget-bin/www_bget?map04510

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• TGF-beta signaling pathway
• Phagosome
• Focal adhesion
• Malaria
• ECM-receptor interaction