CD41631

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD41631

CD41631

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Ldb3

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• LIM domain binding 3

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• PDZ-LIM domain protein
• LIM domain-binding protein 3
• LIM domain binding 3
• protein cypher
• protein oracle
• oracle protein
• Z-band alternatively spliced PDZ-motif protein

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• cypher
• PDLIM6
• AW742271
• ZASP

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/24131

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• LIM domain binding 3
  http://metadb.riken.jp/db/mgi_rdf/MGI:1344412

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039073
• https://www.ncbi.nlm.nih.gov/nuccore/NM_011918
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039072
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039075
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039076
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039071
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039074

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000021798

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.29733

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605906

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• R. Passier, et.al., Oracle, a novel PDZ-LIM domain protein expressed in heart and skeletal muscle., Mechanisms of development, 2000, 92
  http://rdf.ncbi.nlm.nih.gov/pubmed/10727866
• Q. Zhou, et.al., Cypher, a striated muscle-restricted PDZ and LIM domain-containing protein, binds to alpha-actinin-2 and protein kinase C., The Journal of biological chemistry, 1999, 274
  http://rdf.ncbi.nlm.nih.gov/pubmed/10391924
• G. Faulkner, et.al., ZASP: a new Z-band alternatively spliced PDZ-motif protein., The Journal of cell biology, 1999, 146
  http://rdf.ncbi.nlm.nih.gov/pubmed/10427098
• http://rdf.ncbi.nlm.nih.gov/pubmed/20932939
• Q. Zhou, et.al., Ablation of Cypher, a PDZ-LIM domain Z-line protein, causes a severe form of congenital myopathy., The Journal of cell biology, 2001, 155
  http://rdf.ncbi.nlm.nih.gov/pubmed/11696561
• Anh T. Nguyen, et.al., DOT1L regulates dystrophin expression and is critical for cardiac function., Genes & development, 2011, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/21289070
• Norbert. Frey, et.al., Calsarcin-3, a novel skeletal muscle-specific member of the calsarcin family, interacts with multiple Z-disc proteins., The Journal of biological chemistry, 2002, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/11842093
• Zhaohui. Li, et.al., A ZASP missense mutation, S196L, leads to cytoskeletal and electrical abnormalities in a mouse model of cardiomyopathy., Circulation. Arrhythmia and electrophysiology, 2010, 3
  http://rdf.ncbi.nlm.nih.gov/pubmed/20852297
• Auinash. Kalsotra, et.al., A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart., Proceedings of the National Academy of Sciences of the United States of America, 2008, 105
  http://rdf.ncbi.nlm.nih.gov/pubmed/19075228
• Pernilla. von Nandelstadh, et.al., A class III PDZ binding motif in the myotilin and FATZ families binds enigma family proteins: a common link for Z-disc myopathies., Molecular and cellular biology, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19047374

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• protein kinase C binding
  http://purl.obolibrary.org/obo/GO_0005080
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• cell projection
  http://purl.obolibrary.org/obo/GO_0042995
• cytoskeleton
  http://purl.obolibrary.org/obo/GO_0005856
• Z disc
  http://purl.obolibrary.org/obo/GO_0030018
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName