Brain Transcriptome Database (BrainTx)
トランスクリプトームデータ
CD48277
http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD48277
CD48277(トランスクリプトームデータ)
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CD48277
トランスクリプトームデータ
遺伝子シンボル
http://metadb.riken.jp/db/BrainTx/geneSymbol
Snrnp200
遺伝子名
http://metadb.riken.jp/db/BrainTx/geneName
small nuclear ribonucleoprotein 200 (U5)
別名
http://metadb.riken.jp/db/BrainTx/alt_name
U5 snRNP-specific protein, 200 kDa (DEXH RNA helicase family)
small nuclear ribonucleoprotein 200kDa (U5)
activating signal cointegrator 1 complex subunit 3-like 1
U5 small nuclear ribonucleoprotein 200 kDa helicase
small nuclear ribonucleoprotein 200 (U5)
別名略称
http://metadb.riken.jp/db/BrainTx/alt_symbol
HELIC2
BC011390
U5-200-KD
A330064G03Rik
U5-200KD
Ascc3l1
NCBI遺伝子
http://metadb.riken.jp/db/BrainTx/NCBIGene
https://www.ncbi.nlm.nih.gov/gene/320632
MGI遺伝子
http://metadb.riken.jp/db/BrainTx/mgiGene
small nuclear ribonucleoprotein 200 (U5)
http://metadb.riken.jp/db/mgi_rdf/MGI:2444401
BrainTx遺伝子
http://metadb.riken.jp/db/BrainTx/brainTxGene
脳発現画像
http://metadb.riken.jp/db/BrainTx/brainExpressionImage
時系列発現 (小脳)
http://metadb.riken.jp/db/BrainTx/brainExpression
脳発現特異性/組織別発現
http://metadb.riken.jp/db/BrainTx/brainSpecificity
BrainTx遺伝子カテゴリー
http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory
NCBI Accession Number
http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber
https://www.ncbi.nlm.nih.gov/nuccore/NM_177214
Ensembl 遺伝子
http://metadb.riken.jp/db/BrainTx/ensemblGene
http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000003660
UniGene 遺伝子
http://metadb.riken.jp/db/BrainTx/uniGene
https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.215860
OMIM ID
http://metadb.riken.jp/db/BrainTx/omim
https://www.omim.org/entry/603434?search=603434&highlight=601664
PubMed ID (PMID)
http://rdf.ncbi.nlm.nih.gov/pubmed/
Noriko. Okazaki, et.al., Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries., DNA research : an international journal for rapid publication of reports on genes and genomes, 2004, 11
http://rdf.ncbi.nlm.nih.gov/pubmed/15368895
James W. Thomas, et.al., Comparative sequence analysis of a single-gene conserved segment in mouse and human., Mammalian genome : official journal of the International Mammalian Genome Society, 2003, 14
http://rdf.ncbi.nlm.nih.gov/pubmed/14694903
Adrienne E. McKee, et.al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain., BMC developmental biology, 2005, 5
http://rdf.ncbi.nlm.nih.gov/pubmed/16033648
J. Lauber, et.al., The HeLa 200 kDa U5 snRNP-specific protein and its homologue in Saccharomyces cerevisiae are members of the DEXH-box protein family of putative RNA helicases., The EMBO journal, 1996, 15
http://rdf.ncbi.nlm.nih.gov/pubmed/8670905
Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
Gene Ontology
http://metadb.riken.jp/db/BrainTx/golink
spliceosomal complex
http://purl.obolibrary.org/obo/GO_0005681
RNA splicing
http://purl.obolibrary.org/obo/GO_0008380
nucleus
http://purl.obolibrary.org/obo/GO_0005634
ATP binding
http://purl.obolibrary.org/obo/GO_0005524
nucleotide binding
http://purl.obolibrary.org/obo/GO_0000166
catalytic step 2 spliceosome
http://purl.obolibrary.org/obo/GO_0071013
http://purl.obolibrary.org/obo/GO_1990904
hydrolase activity
http://purl.obolibrary.org/obo/GO_0016787
ATP-dependent helicase activity
http://purl.obolibrary.org/obo/GO_0008026
U5 snRNP
http://purl.obolibrary.org/obo/GO_0005682
nucleic acid binding
http://purl.obolibrary.org/obo/GO_0003676
helicase activity
http://purl.obolibrary.org/obo/GO_0004386
InterPro ID
http://metadb.riken.jp/db/BrainTx/interPro
KEGG Pathway ID
http://metadb.riken.jp/db/BrainTx/keggPathwayID
http://www.genome.jp/dbget-bin/www_bget?map03040
KEGG Pathway 名称
http://metadb.riken.jp/db/BrainTx/keggPathwayName
Spliceosome
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