CD48277

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD48277

CD48277

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Snrnp200

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• small nuclear ribonucleoprotein 200 (U5)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• U5 snRNP-specific protein, 200 kDa (DEXH RNA helicase family)
• small nuclear ribonucleoprotein 200kDa (U5)
• activating signal cointegrator 1 complex subunit 3-like 1
• U5 small nuclear ribonucleoprotein 200 kDa helicase
• small nuclear ribonucleoprotein 200 (U5)

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• HELIC2
• BC011390
• U5-200-KD
• A330064G03Rik
• U5-200KD
• Ascc3l1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/320632

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• small nuclear ribonucleoprotein 200 (U5)
  http://metadb.riken.jp/db/mgi_rdf/MGI:2444401

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_177214

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000003660

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.215860

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601664

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Noriko. Okazaki, et.al., Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries., DNA research : an international journal for rapid publication of reports on genes and genomes, 2004, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/15368895
• James W. Thomas, et.al., Comparative sequence analysis of a single-gene conserved segment in mouse and human., Mammalian genome : official journal of the International Mammalian Genome Society, 2003, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/14694903
• Adrienne E. McKee, et.al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain., BMC developmental biology, 2005, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/16033648
• J. Lauber, et.al., The HeLa 200 kDa U5 snRNP-specific protein and its homologue in Saccharomyces cerevisiae are members of the DEXH-box protein family of putative RNA helicases., The EMBO journal, 1996, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/8670905
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• spliceosomal complex
  http://purl.obolibrary.org/obo/GO_0005681
• RNA splicing
  http://purl.obolibrary.org/obo/GO_0008380
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• catalytic step 2 spliceosome
  http://purl.obolibrary.org/obo/GO_0071013
• http://purl.obolibrary.org/obo/GO_1990904
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• ATP-dependent helicase activity
  http://purl.obolibrary.org/obo/GO_0008026
• U5 snRNP
  http://purl.obolibrary.org/obo/GO_0005682
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• helicase activity
  http://purl.obolibrary.org/obo/GO_0004386

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03040

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Spliceosome