CD05429

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD05429

CD05429

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Tcerg1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• transcription elongation regulator 1 (CA150)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• transcription elongation regulator 1
• transcription factor CA150b
• coactivator of 150 kD
• TATA box binding protein (TBP)-associated factor, RNA polymerase II, S, 150kD
• formin-binding protein 28
• transcription elongation regulator 1 (CA150)
• TATA box-binding protein-associated factor 2S
• FBP 28
• transcription factor CA150

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Fbp28
• 2900090C16Rik
• p144
• CA150b
• ca150
• 2410022J09Rik
• Taf2s
• FBP28
• AI428505
• FBP23

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/56070

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• transcription elongation regulator 1 (CA150)
  http://metadb.riken.jp/db/mgi_rdf/MGI:1926421

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039474

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000024498

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.270511

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605409

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• M J. Macias, et.al., Structural analysis of WW domains and design of a WW prototype., Nature structural biology, 2000, 7
  http://rdf.ncbi.nlm.nih.gov/pubmed/10802733
• Miriana. Petrovich, et.al., Phi-analysis at the experimental limits: mechanism of beta-hairpin formation., Journal of molecular biology, 2006, 360
  http://rdf.ncbi.nlm.nih.gov/pubmed/16784750
• Shigetoshi. Yokoyama, et.al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059953
• J. Bohne, et.al., Expression analysis and mapping of the mouse and human transcriptional regulator CA150., Mammalian genome : official journal of the International Mammalian Genome Society, 2000, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/11003711
• Ximena. Ramirez-Espain, et.al., Structural characterization of a new binding motif and a novel binding mode in group 2 WW domains., Journal of molecular biology, 2007, 373
  http://rdf.ncbi.nlm.nih.gov/pubmed/17915251
• Brad G. Hoffman, et.al., Identification of transcripts with enriched expression in the developing and adult pancreas., Genome biology, 2008, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/18554416
• D C. Chan, et.al., Formin binding proteins bear WWP/WW domains that bind proline-rich peptides and functionally resemble SH3 domains., The EMBO journal, 1996, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/8605874
• M. Shimada, et.al., Molecular cloning and splicing isoforms of mouse p144, a homologue of CA150., Journal of biochemistry, 1999, 126
  http://rdf.ncbi.nlm.nih.gov/pubmed/10578054
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• nuclear matrix
  http://purl.obolibrary.org/obo/GO_0016363
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03040

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Spliceosome