IMPC RDF data 統計解析結果（定量値）

undimensional_105361
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_105361

undimensional_105361(統計解析結果（定量値）)

URI表示モード

undimensional_105361

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47529
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47529

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Open Field
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/BCM_OFD_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Whole arena resting time
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_007_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/ERGCB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_OFD_007_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

375

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

375

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

890.5472

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

937.2608

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

822.525

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

928.8625

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

3d0e7f3e1b25a329501d61945fc39368

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0341058607617356

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -9.06%, Male: -1.96%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

41.504373812077

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

4.9090160308672

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

2.52428992135099e-16

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.00404971325047614

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

ERGCB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0186694680322272

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

7.37e-10

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

3.60728125871038e-07

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

888.103228737535

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

6.06415398263283

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0219715834374155

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-82.7214266498241

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

35.7640217923597

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.021091866377023

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

35.7634760644755
-17.888300461901

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

35.7634760644755
-17.888300461901

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.617145943884088

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information