IMPC RDF data 統計解析結果（定量値）

undimensional_105582
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_105582

undimensional_105582(統計解析結果（定量値）)

URI表示モード

undimensional_105582

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47833
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47833

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Open Field
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/BCM_OFD_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Periphery distance travelled
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_010_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/GMECB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_OFD_010_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

hypoactivity
http://purl.obolibrary.org/obo/MP_0001402

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

375

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

375

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

9

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

2017.16

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

1590.29333333333

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

2213.33333333333

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

1416.14285714286

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

3d0e7f3e1b25a329501d61945fc39368

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0834388443782203

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 24.84%, Male: -6.04%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-267.601186219953

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

66.9187576214571

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

7.38693286447412e-05

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

-31.2601757761742

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

12.2639706176699

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.011121032607863

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.00166087528111105

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

GMECB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0780123674697601

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.590472156162502

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.00325683627225417

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

2643.56298643186

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

246.404300939992

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0480263434839912

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

448.357372129077

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

215.072129224521

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.037636108471684

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-109.067006726857
210.252501855223

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-109.067006726857
210.252501855223

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.604183621905277

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information