IMPC RDF data 統計解析結果（定量値）

undimensional_106897
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_106897

undimensional_106897(統計解析結果（定量値）)

URI表示モード

undimensional_106897

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_46916
http://metadb.riken.jp/db/IMPC_RDF/Cohort/46916

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Open Field
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/BCM_OFD_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Whole arena resting time
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_007_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/SMOPB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_OFD_007_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

hypoactivity
http://purl.obolibrary.org/obo/MP_0001402

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

375

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

375

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

890.5472

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

937.2608

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

904.4875

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

1023.0625

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

3d0e7f3e1b25a329501d61945fc39368

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.08990928172796

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -2.58%, Male: 6.5%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

19.4107846210268

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

9.29781906600291

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.0373666133847804

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

4.00284447802934

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

1.72332753406081

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.0206200546140657

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.0145372828476469

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

SMOPB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0835512969418239

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

2.33112797452556e-09

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

4.03812316788644e-06

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

810.555867533497

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

34.8054297554943

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0361821194802606

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-23.6392349106581

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

47.2260672495354

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.616919282881075

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

44.0541285152486
59.4359714140208

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

44.0541285152486
59.4359714140208

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.177937254370428

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - can not classify effect

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information