IMPC RDF data 統計解析結果（定量値）

undimensional_117271
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_117271

undimensional_117271(統計解析結果（定量値）)

URI表示モード

undimensional_117271

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_41055
http://metadb.riken.jp/db/IMPC_RDF/Cohort/41055

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

German Mouse Clinic
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/HMGU_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Combined SHIRPA and Dysmorphology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CSD_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Locomotor activity
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CSD_032_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/HMGU-EPD0078_3_C03-1-1

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CSD_032_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

919

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

894

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

19.923937360179

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

18.8705114254625

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

31.4285714285714

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

22

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

65ed200ce0a6c1448296a1366bd42457

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

4.53344537446544e-06

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 55.17%, Male: 10.96%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-0.771669477780004

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.326940126487043

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.0183836760464405

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

1.54475907707079e-06

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

HMGU-EPD0078_3_C03-1-1

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0555083237587293

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0609859356678737

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

4.34459587480481e-08

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

19.4725493312296

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.338301372116758

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

2.04979085483004e-06

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

10.7289156464907

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

1.79202062725837

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

2.64644314203589e-09

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

2.1308337912783
1.73840290885624

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

2.1308337912783
1.73840290885624

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.220480597880313

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information