IMPC RDF data 統計解析結果（定量値）

undimensional_125470
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_125470

undimensional_125470(統計解析結果（定量値）)

URI表示モード

undimensional_125470

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38169
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38169

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 2
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

FACs Analysis
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_018_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Granulocyte Gr1+ percentage
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_018_001_007

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0037_1_E07_10554

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_018_001_007

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased granulocyte number
http://purl.obolibrary.org/obo/MP_0000334

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

41

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

4

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

37

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

7.81081081081081

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

10.5714634146341

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

4.70285714285714

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

3.575

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

15b004651145596109b36eb1f874455c

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.572531493809232

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-1.12563348544516

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

2.1939093183243

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.609297469833598

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -13.02%, Male: -13.02%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0037_1_E07_10554

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.180935410343623

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

9.93572064855806

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

2.43661285289415

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.325996269378343

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information