IMPC RDF data 統計解析結果（定量値）

undimensional_126993
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_126993

undimensional_126993(統計解析結果（定量値）)

URI表示モード

undimensional_126993

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_41051
http://metadb.riken.jp/db/IMPC_RDF/Cohort/41051

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Medical Research Council centre for mouse genetics
http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

Harwell
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/HRWL_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Body Composition (DEXA lean/fat)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_DXA_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Lean/Body weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_DXA_008_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/H-GOT1-TM1B-C02

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_DXA_008_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased lean body mass
http://purl.obolibrary.org/obo/MP_0003961

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

1818

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

1788

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

0.760402411073826

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

0.768903863586359

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

0.731766875

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

0.774310625

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

1f0313a8a852318ae73c07c4d6ff42e0

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.317880398175698

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-0.0157987740198552

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.0159063157145975

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.320672027191339

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -2.07%, Male: -2.07%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.00639220643934589

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.00138361774924946

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

3.99740564026412e-06

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

9.61309029009708e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

H-GOT1-TM1B-C02

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.319954389979267

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.260606111050537

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

8.42410450459421e-09

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

0.763152849092875

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.00135958035635861

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.311603065902426

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information