IMPC RDF data 統計解析結果（定量値）

undimensional_133467
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_133467

undimensional_133467(統計解析結果（定量値）)

URI表示モード

undimensional_133467

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_45018
http://metadb.riken.jp/db/IMPC_RDF/Cohort/45018

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

The Centre for Phenogenomics
http://metadb.riken.jp/db/IMPC_RDF/Organization/27

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

TCP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/TCP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Fear Conditioning
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_FEA_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Cue Baseline % Freezing Time
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_FEA_015_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/TCPR0860_ADOR

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_FEA_015_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

http://purl.obolibrary.org/obo/MP_0020421

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

256

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

0

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

0

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

20.5073046875

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

19.93125

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

fe13cffb692c5b4ae29b6dd77054d7f8

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.529324304995246

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

4.48263251997208

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

6.82500885731222

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.512087039264348

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: NA, Male: 21.88%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

TCPR0860_ADOR

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.74774243503196

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.00676271738085373

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

19.9529279650532

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

1.41627772228709

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant it is for the one sex tested

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information