IMPC RDF data 統計解析結果（定量値）

undimensional_138060
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_138060

undimensional_138060(統計解析結果（定量値）)

URI表示モード

undimensional_138060

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48017
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48017

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_48647
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48647

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Dexa-scan analysis
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_005_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Fat Mass
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_005_001_002

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0083_2_E03

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

M-G-P_005_001_002

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased total body fat amount
http://purl.obolibrary.org/obo/MP_0010025

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

0

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

0

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

178

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

12.7743820224719

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

10.0628571428571

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

d41d8cd98f00b204e9800998ecf8427e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.00488005995107039

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-3.50673623986541

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

1.22136273144718

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.00471170599906473

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -27.67%, Male: NA

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.511088679576118

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0083_2_E03

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.911251954143005

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.281072004828647

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

12.8159481332614

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.306118702921601

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant it is for the one sex tested

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information