undimensional_139146

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_139146

undimensional_139146

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48818
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_37978
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37978

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Institut Clinique de la Souris
  http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 2
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Grip-Strength
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_009_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Forelimb grip strength normalised against body weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_009_001_703

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0039_3_C02

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_009_001_703

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased grip strength
  http://purl.obolibrary.org/obo/MP_0010052

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased grip strength
  http://purl.obolibrary.org/obo/MP_0010053

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 403

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 12

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 387

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 10

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 4.57928237726098

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 4.04687937965261

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 3.938053

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 4.4210325

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• b114ce3ef8bb816cc6b14ec12f0314c8

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.00213806218318519

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -14.59%, Male: 8.56%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -0.513406750682091

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.049246952299896

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 7.18232624983593e-24

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.34715972150222

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• EPD0039_3_C02

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.0646811475138909

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.907253465953836

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.449504336748177

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 4.56605207850635

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.102775722277706

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.000467820913348405

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -0.627999078506346

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.724547009254935

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.386355187724283

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.368387172175746
• 0.719582754265906

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.368387172175746
• 0.719582754265906

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.608838446661516

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information