undimensional_14528

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_14528

undimensional_14528

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48818
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_37994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37994

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Medical Research Council centre for mouse genetics
  http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 1
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Dexa Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_707

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/HEPD0556_7_B06

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_022_001_707

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased body weight
  http://purl.obolibrary.org/obo/MP_0001260

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 181

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 10

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 189

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 10

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 24.3237037037037

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 30.5413259668508

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 27.326

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 29.703

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 733e047f4e0ac9a534c05fe3a1b4eda6

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0101509322716132

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 9.13%, Male: -4.32%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 6.4945591359954

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.268611787214925

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 5.09462773597045e-74

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.336537080006889

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• HEPD0556_7_B06

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.275670362754777

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.496186853981991

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.277694289329996

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 24.2718107741539

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.21477861169617

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.00248279736860535

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 2.50350665396205

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.966282432750854

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0100146201717683

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -1.18391960401509
• 1.0205284665927

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -1.18391960401509
• 1.0205284665927

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.24687652203349

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - females only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information