undimensional_148116

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_148116

undimensional_148116

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_38027
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38027

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_38729
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38729

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
  http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• GMC Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/GMC_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Shirpa (GMC)
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/GMC_923_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Body weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/GMC_923_001_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/NCAM1

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• GMC_923_001_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 15

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 13

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 21

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 21

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 20.5095238095238

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 28.5066666666667

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 18.247619047619

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 22.7923076923077

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d41d8cd98f00b204e9800998ecf8427e

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 3.31077340593785e-09

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -10.05%, Male: -27.02%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 7.6942044741108

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.853809704854372

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 8.17304968417811e-13

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.224676303300896

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• NCAM1

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.519075911468095

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 20.561110073017

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.717870304925327

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.00221567392895428

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -2.20836723827695

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.73265788360919

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.00375039963661503

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -5.93500311913135
• 0.908136229031793

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -5.93500311913135
• 0.908136229031793

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 1.44770994476459e-08

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - different size as males greater

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information