IMPC RDF data 統計解析結果（定量値）

undimensional_151515
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_151515

undimensional_151515(統計解析結果（定量値）)

URI表示モード

undimensional_151515

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_40460
http://metadb.riken.jp/db/IMPC_RDF/Cohort/40460

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

German Mouse Clinic
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/HMGU_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Hematology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Hemoglobin
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_003_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/Monterotondo-EPD0168_1_H11-1-1

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_HEM_003_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased hemoglobin content
http://purl.obolibrary.org/obo/MP_0002874

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

increased hemoglobin content
http://purl.obolibrary.org/obo/MP_0005564

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

913

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

10

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

880

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

10

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

16.2028409090909

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

16.5700985761227

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

16.03

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

14.97

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

b3c0a42278ecd9164646b38cc2afcf9c

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0372961517392041

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 3.92%, Male: -4.11%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.557081460877724

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.0841755994106465

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

4.93434160591251e-11

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

-0.0319231320427022

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.0130865784938559

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.0148193832301673

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

Monterotondo-EPD0168_1_H11-1-1

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.665061844398471

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

3.08946363468882e-06

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

16.9542425302886

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.320189364528774

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0105165919985039

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

0.642904041196134

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.423094818465761

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.128825367450585

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.673759069523432
0.413160149682546

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.673759069523432
0.413160149682546

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.103138767454557

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - can not classify effect

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information