undimensional_154705

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_154705

undimensional_154705

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_39069
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_45248
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/45248

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• University of California at Davis School of Veterinary Medicine
  http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• UCD Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Hematology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Neutrophil differential count
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_029_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/BL5631

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_HEM_029_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• increased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000219

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000219

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000219

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 661

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 662

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 17.8295317220544

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 20.4319062027231

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 22.61125

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 20.215

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d673a881e1b99112d08f1ee3b9057eda

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0471160909027912

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 24.57%, Male: 1.34%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 1.92816005544641

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.372111673388158

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.74492083492511e-07

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

• 0.107624648427914

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

• 0.0403084610353366

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

• 0.00772848258923096

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• BL5631

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.316573995292663

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.0056466041758314

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 15.069501166411

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 1.05871898985392

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0443537952900082

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 4.70747956203491

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 2.11600709303104

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0263617502065106

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 2.201717115972
• 0.255991759623367

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 2.201717115972
• 0.255991759623367

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.907466543970845

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - females only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information