undimensional_171500

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_171500

undimensional_171500

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_39069
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_46161
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/46161

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• University of California at Davis School of Veterinary Medicine
  http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• UCD Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Open Field
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_OFD_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Periphery distance travelled
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_010_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/BL4814

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_OFD_010_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• hyperactivity
  http://purl.obolibrary.org/obo/MP_0001399

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• hypoactivity
  http://purl.obolibrary.org/obo/MP_0001402

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 651

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 658

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 5332.30243161094

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 4343.57910906298

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 4736.14285714286

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 4919

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 3e2b29ddaa5289030c5b43ca968942e0

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0486776764255061

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -11.81%, Male: 13.97%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -991.121132520576

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 51.6913067789037

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 8.45920766017612e-70

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.01433863806784e-07

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• BL4814

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.903526364549395

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.00213843103411956

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 1.30304079585199e-06

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 5324.17932219497

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 39.3989587471113

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0153942875564708

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -571.831744251349

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 374.151985044266

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.126751620158376

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 402.184630234966
• 676.449195310625

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 402.184630234966
• 676.449195310625

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0929006258626065

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information