undimensional_172091

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_172091

undimensional_172091

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_39069
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_44805
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44805

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• University of California at Davis School of Veterinary Medicine
  http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• UCD Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Open Field
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_OFD_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Number of rears - total
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_021_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/BL5138

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_OFD_021_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• decreased vertical activity
  http://purl.obolibrary.org/obo/MP_0002757

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased vertical activity
  http://purl.obolibrary.org/obo/MP_0002757

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased vertical activity
  http://purl.obolibrary.org/obo/MP_0002757

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 651

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 658

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 154.697568389058

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 207.364055299539

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 104.571428571429

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 111.5

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 3e2b29ddaa5289030c5b43ca968942e0

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0279278574754105

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -8.09%, Male: -38.38%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 52.8042365538985

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 5.26184729000055

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.26524789814104e-22

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• BL5138

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.99045898231239

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 7.37e-10

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 152.538692818357

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 4.96862142074239

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0241338202899044

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -14.5683157078453

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 24.2820097111164

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.548669503978028

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -69.1127685538562
• 25.6232623248119

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -69.1127685538562
• 25.6232623248119

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.00711126106613347

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information