undimensional_211881

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_211881

undimensional_211881

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_39069
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_44440
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44440

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• University of California at Davis School of Veterinary Medicine
  http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• UCD Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Composition (DEXA lean/fat)
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_DXA_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Body length
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_DXA_006_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/CR1397

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_DXA_006_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased body length
  http://purl.obolibrary.org/obo/MP_0001258

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased body length
  http://purl.obolibrary.org/obo/MP_0001257

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 171

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 170

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 8.96170588235294

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 9.13134502923977

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 8.9925

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 8.9175

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• cb1584811cf6c88f3e279160c4bc8c88

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0696039159020988

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 0.36%, Male: -2.82%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 0.16872806828873

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.019612046935567

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.34194785932709e-15

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.542278790233154

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• CR1397

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.892941807852569

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.216647595088868

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.472047240724344

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 8.96496971203471

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.0159676480094013

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0479654836874072

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 0.032896609324532

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.102062480155083

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.747510825116515

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.107386856694352
• -0.254902811567921

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.107386856694352
• -0.254902811567921

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0184524940351475

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information