IMPC RDF data 統計解析結果（定量値）

undimensional_225990
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_225990

undimensional_225990(統計解析結果（定量値）)

URI表示モード

undimensional_225990

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48016
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48016

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_48071
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48071

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Select Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/MGP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Buffy coat peripheral blood leukocyte immunophenotyping
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/MGP_BCI_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

T cell CD3+ percentage
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/MGP_BCI_001_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0469_5_C11

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

MGP_BCI_001_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

increased T cell number
http://purl.obolibrary.org/obo/MP_0005015

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

261

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

6

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

237

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

12.5772995780591

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

9.47275862068966

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

11.6657142857143

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

8.85833333333333

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

a55a312a5e11d986aa7c6e14c005d49f

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.755580497327063

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

0.317274801115142

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.946951701723427

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.737748858743011

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 2.9%, Male: 2.9%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-2.81619134699402

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.21233841764219

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

5.48670602183815e-34

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.00175081578105806

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0469_5_C11

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.929114973614195

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.546423143324768

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.000619382002482754

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

12.4662419829404

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.228504368848577

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.76250176973903

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information