undimensional_226751

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_226751

undimensional_226751

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_37877
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37877

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_37909
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37909

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Medical Research Council centre for mouse genetics
  http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 1
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Heart Weight/Tibia Length Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_708

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/C3H.Cg-Ptk7%3Cchz%3E/H

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_022_001_708

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased body weight
  http://purl.obolibrary.org/obo/MP_0001260

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 64

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 56

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 28.7075

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 32.97765625

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 30.1757142857143

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 29.985

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d41d8cd98f00b204e9800998ecf8427e

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0944791848267112

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 4.33%, Male: -7.16%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 3.8892105599032

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.801677116217107

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 4.23294167807768e-06

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.192681199166455

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• C3H.Cg-Ptk7<chz>/H

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.928965984003316

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.644559429124628

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.471580235253346

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 28.8125559121838

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.628467348926893

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0349393718861464

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 1.33619292766713

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 1.26568407492977

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.293501830042595

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -2.21072333224344
• 1.32841984768339

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -2.21072333224344
• 1.32841984768339

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0990309753060744

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information