undimensional_227681

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_227681

undimensional_227681

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_37898
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37898

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_38035
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38035

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Institut Clinique de la Souris
  http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 1
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Dysmorphology Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_703

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/Nr1h4

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_022_001_703

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 63

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 10

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 51

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 9

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 19.1274509803922

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 24.7142857142857

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 19.1777777777778

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 25.14

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d41d8cd98f00b204e9800998ecf8427e

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.977410640050512

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

• -0.0297659328955613

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

• 0.493780400627041

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

• 0.952033236445264

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -0.13%, Male: -0.13%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 5.64630287153205

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.472949395530565

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 5.12079558482054e-08

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.505292297877923

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• Nr1h4

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.851463096305451

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.474026624975439

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.541959946669101

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 19.1198967939911

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.345813263639179

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 0

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.758553873415341

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - both sexes equally

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information