undimensional_229744

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_229744

undimensional_229744

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_44388
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_44216
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44216

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Jackson Laboratory
  http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• JAX Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Light-Dark Test
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/JAX_LDT_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Side changes
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/JAX_LDT_001_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/JR27811

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• JAX_LDT_001_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• abnormal behavioral response to light
  http://purl.obolibrary.org/obo/MP_0011275

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 1699

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 1728

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 60.7152777777778

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 55.9228958210712

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 59.25

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 38.75

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 3462df3c0b11cfd6d7d2c3a1e149d906

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.171033542423927

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

• -8.82114674350076

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

• 6.45368053828495

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

• 0.171781761945594

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -15.13%, Male: -15.13%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -8.85043626807263

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 1.25713548627888

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.38865257845987e-12

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

• 1.09477628576308

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

• 0.21066478397877

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

• 2.16880598909368e-07

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 1.05164326961557e-09

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• JR27811

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.0955930997955383

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.98050786480672

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 1.42092826341567e-09

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 40.1754611953599

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 4.04776225760379

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 0

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.129214580191053

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - both sexes equally

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information