IMPC RDF data 統計解析結果（定量値）

undimensional_242423
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_242423

undimensional_242423(統計解析結果（定量値）)

URI表示モード

undimensional_242423

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_38010
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38010

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38437
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38437

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_025_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Aspartate aminotransferase
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_025_001_013

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0064_2_D04

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

M-G-P_025_001_013

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased circulating aspartate transaminase level
http://purl.obolibrary.org/obo/MP_0005632

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

336

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

329

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

187.626747720365

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

163.021726190476

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

205.757142857143

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

148.214285714286

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

0163ed1f2e442faa5e9e94554d82f875

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.995380105373824

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-0.236723604778633

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

26.3470089546126

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.992834132560654

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -0.14%, Male: -0.14%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-22.3531582915414

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

6.57510498384585

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.000718127699041552

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0064_2_D04

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0814666588566556

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.329553104842762

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

185.236044940657

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

6.28957550888603

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.256558442564962

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information