IMPC RDF data 統計解析結果（定量値）

undimensional_244927
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_244927

undimensional_244927(統計解析結果（定量値）)

URI表示モード

undimensional_244927

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_38010
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38010

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38387
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38387

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_025_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Total protein
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_025_001_007

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0065_1_F10

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

M-G-P_025_001_007

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

338

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

10

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

333

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

49.0924924924925

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

51.0044378698225

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

48.2571428571429

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

46.75

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

0163ed1f2e442faa5e9e94554d82f875

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

4.42075508884424e-06

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -1.43%, Male: -10.19%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

1.93616956593103

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.193162635683772

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

5.03916500159289e-22

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.284321183820175

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0065_1_F10

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0912787587957756

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.196573694822269

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.0948605374004604

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

49.1377847339714

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.262622023352135

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00166206747037789

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-0.716421803151818

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

1.17753188133645

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.543137536736832

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-5.0936704023319
1.02396938727554

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-5.0936704023319
1.02396938727554

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

8.47467503232564e-07

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information