IMPC RDF data 統計解析結果（定量値）

undimensional_261394
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_261394

undimensional_261394(統計解析結果（定量値）)

URI表示モード

undimensional_261394

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47343
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47343

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_003

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Total protein
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_006_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/DDXVB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CBC_006_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

77

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

77

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

45.4805194805195

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

45.7402597402597

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

38.7142857142857

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

41.7142857142857

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

0f55a9c91b38a4918b3d2b97209101fd

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.021560278993159

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -13.5%, Male: -1.72%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.364087459067025

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.14769180835372

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.752532900973529

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.00077558893400395

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

DDXVB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.120199899126215

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.00124443429217575

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.000597497599234128

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

45.1079461244196

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.863224228661994

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0229404292253217

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-6.09711373225703

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

2.10370559854675

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.00577953461490603

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.775602432951829
1.96914201285171

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.775602432951829
1.96914201285171

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.695531112867148

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information