undimensional_26274

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_26274

undimensional_26274

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_47994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_43261
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/43261

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Model Animal Research Center
  http://metadb.riken.jp/db/IMPC_RDF/Organization/35

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• IMPC Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/IMPC_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Combined SHIRPA and Dysmorphology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CSD_002

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Locomotor activity
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CSD_032_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/Defb43_EPD0309_3_D12-1

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_CSD_032_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• hypoactivity
  http://purl.obolibrary.org/obo/MP_0001402

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• hyperactivity
  http://purl.obolibrary.org/obo/MP_0001399

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 684

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 714

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 23.1162464985994

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 22.2236842105263

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 28.1428571428571

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 21

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 54ad196f8b2652d6669282d5baaa9e0e

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0624507903329982

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 18.13%, Male: -9.74%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -0.815544358882099

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.28881843073722

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 0.0048230748328431

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.387699026435542

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• Defb43_EPD0309_3_D12-1

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.560581478466816

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.896001050456444

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.108882331677814

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 23.1140479611959

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.303875082469353

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0204184602242901

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 4.11589630170586

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 2.39735600824288

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0862574453385847

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -2.21141648226919
• 2.39740099040539

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -2.21141648226919
• 2.39740099040539

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.356488286677202

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information