undimensional_272534

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_272534

undimensional_272534

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_47994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_42765
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/42765

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Model Animal Research Center
  http://metadb.riken.jp/db/IMPC_RDF/Organization/35

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• IMPC Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/IMPC_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Hematology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Neutrophil cell count
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_030_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/Bola2_EPD0384_6_A09

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_HEM_030_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000219

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000222

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 444

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 472

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 0.633008474576271

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 1.02013513513514

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 0.715

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 2.10714285714286

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 08aa37a898ab923b9ffdbd01c0077040

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0694935626019604

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -24.25%, Male: 133.26%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 0.375269404498666

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.0480375963711185

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.75578485716484e-14

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• Bola2_EPD0384_6_A09

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.149596320024797

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 6.3759476349875e-06

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 0.625349770881845

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.0529247401792033

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0414331845827594

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -0.201164689451749

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.450986369668993

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.655677522883693

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.493692743504509
• 1.10531962979384

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.493692743504509
• 1.10531962979384

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0254361092389826

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information