IMPC RDF data 統計解析結果（定量値）

undimensional_277020
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_277020

undimensional_277020(統計解析結果（定量値）)

URI表示モード

undimensional_277020

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47741
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47741

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_003

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Total protein
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_006_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/ADGBB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CBC_006_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

increased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005568

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

10

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

6

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

11

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

45.0181818181818

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

43.63

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

40.1142857142857

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

49.6666666666667

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

b21b1d059fbc8209ba440e564664344e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, generalized least squares, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_generalized_least_squares_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

0

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0319457617606203

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -11.04%, Male: 13.59%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-1.38818181818182

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.39658861636595

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.328182453197428

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.433079908083631

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

ADGBB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.687761508864127

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

45.0181818181818

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.963737704723736

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0109689487010195

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-4.90389610389612

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

2.74609419830384

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.0842494514516867

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

6.03666666666666
2.95566454107767

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

6.03666666666666
2.95566454107767

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.049985964043384

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information