IMPC RDF data 統計解析結果（定量値）

undimensional_299712
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_299712

undimensional_299712(統計解析結果（定量値）)

URI表示モード

undimensional_299712

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_43286
http://metadb.riken.jp/db/IMPC_RDF/Cohort/43286

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Model Animal Research Center
http://metadb.riken.jp/db/IMPC_RDF/Organization/35

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

IMPC Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/IMPC_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Open Field
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_OFD_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Whole arena resting time
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_OFD_007_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/Acsm1_cas9_del29

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_OFD_007_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

hyperactivity
http://purl.obolibrary.org/obo/MP_0001399

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

hypoactivity
http://purl.obolibrary.org/obo/MP_0001402

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

849

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

858

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

440.855617715618

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

480.056219081272

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

560.462857142857

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

487.211428571429

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

255420f5f733848ea4493b0bbf4d582d

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0826542690666221

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 10.57%, Male: -22.98%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

9.58802698000588

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

9.56861356324327

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.316498350357778

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

4.4857845267498

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

1.3522738230345

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.00093190604071362

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

1.87623663096035e-05

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

Acsm1_cas9_del29

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.90290340373109

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.13483392346996

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

6.40402377789473e-05

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

350.791821352445

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

27.4902022496298

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0159801912775818

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

48.6997260275272

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

47.726817314312

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.307717681760843

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

58.2341397644742
-105.90454700363

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

58.2341397644742
-105.90454700363

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.0691807139373506

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - can not classify effect

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information