IMPC RDF data 統計解析結果（定量値）

undimensional_30320
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_30320

undimensional_30320(統計解析結果（定量値）)

URI表示モード

undimensional_30320

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_37888
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37888

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Centre for Modeling Human Disease
http://metadb.riken.jp/db/IMPC_RDF/Organization/23

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 1
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Grip Strength Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_709

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/CMHD-TM_N00324P0_T20D4

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_022_001_709

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

45

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

37

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

10

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

20.7108108108108

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

26.9577777777778

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

20.42

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

24.45

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

5ad1a9db3df046f049f97ede3e6a6ddd

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.000180554569276258

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -3.07%, Male: -12.49%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

6.38900033209497

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.369404126238439

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

3.05441364316088e-28

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.925666734955738

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

CMHD-TM_N00324P0_T20D4

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.143104321971396

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.168013586515947

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.35236339460389

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

20.5501100299029

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.35350960613307

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00747106864950586

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-0.730559072768464

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.572797508871826

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.20599416384163

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-2.97269481150508
0.689823504008394

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-2.97269481150508
0.689823504008394

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

4.78654435072988e-05

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information