IMPC RDF data 統計解析結果（定量値）

undimensional_364372
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_364372

undimensional_364372(統計解析結果（定量値）)

URI表示モード

undimensional_364372

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_40630
http://metadb.riken.jp/db/IMPC_RDF/Cohort/40630

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

German Mouse Clinic
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/HMGU_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Hematology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Red blood cell count
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_002_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/H4879-EPD0664_2_F07-1

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_HEM_002_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

increased erythrocyte cell number
http://purl.obolibrary.org/obo/MP_0003131

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased erythrocyte cell number
http://purl.obolibrary.org/obo/MP_0002875

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

918

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

6

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

881

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

10.5232917139614

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

10.9514052287582

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

10.12

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

11.0716666666667

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

b3c0a42278ecd9164646b38cc2afcf9c

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.08711460302778

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -3.74%, Male: 0.68%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.574605558385109

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.0544027472978348

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

2.91073488634344e-25

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

-0.0257530220445483

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.00842460472732734

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.00227318574799841

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

H4879-EPD0664_2_F07-1

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.309373213900742

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0108310056410671

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

11.1300256817361

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.205192518302734

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0411050157869803

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-0.401634096734555

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.217050225424992

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.0644354374795457

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.225877378868154
0.0732745102561303

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.225877378868154
0.0732745102561303

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.745677577409982

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - can not classify effect

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information