undimensional_382121

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_382121

undimensional_382121

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48818
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_38188
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38188

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Medical Research Council centre for mouse genetics
  http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 2
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• FACs Analysis
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_018_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Mature B cells IgD+ percentage
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_018_001_006

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/HEPD0619_1_B04

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_018_001_006

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased mature B cell number
  http://purl.obolibrary.org/obo/MP_0008211

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased mature B cell number
  http://purl.obolibrary.org/obo/MP_0008210

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 154

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 110

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 6

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 91.9454545454546

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 93.1668831168831

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 92.6

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 93.6

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 0be8e417f1e680810654250e640fd849

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0751009010751086

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 0.98%, Male: -0.57%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 1.8067883867103

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.372193025293054

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.28194896925399e-06

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• HEPD0619_1_B04

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.0888159274309225

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 5.35584082651091e-05

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 1.0875388982831e-09

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 91.6155671125417

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.487529040923467

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0219841472340934

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 0.90452704803421

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.522342004224132

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0847267154832294

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.495942674628838
• -0.524711896267565

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.495942674628838
• -0.524711896267565

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.29120632873416

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information