IMPC RDF data 統計解析結果（定量値）

undimensional_38854
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_38854

undimensional_38854(統計解析結果（定量値）)

URI表示モード

undimensional_38854

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47396
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47396

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Baylor College of Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/25

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

BCM Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/BCM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Combined SHIRPA and Dysmorphology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CSD_003

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Locomotor activity
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CSD_032_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/RFNFB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CSD_032_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

hypoactivity
http://purl.obolibrary.org/obo/MP_0001402

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

434

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

443

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

16.6794582392777

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

14.8294930875576

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

16.4285714285714

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

8.375

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

90a6d0764193bc4243363bcdcc04be6e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.202336381910719

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-1.79189265560219

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

1.40696194601233

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.203183349132729

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -11.41%, Male: -11.41%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-1.95648436645443

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.342385868632878

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.56097531273154e-08

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.169905626848652

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

RFNFB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.427993494589741

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.493665614666419

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.452750293336684

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

16.8194104174616

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.368266874342955

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.123801788579974

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information