undimensional_404321

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_404321

undimensional_404321

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_44388
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_47961
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47961

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Jackson Laboratory
  http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• JAX Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Light-Dark Test
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/JAX_LDT_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Time mobile light side
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/JAX_LDT_003_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/JR31505

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• JAX_LDT_003_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• abnormal behavioral response to light
  http://purl.obolibrary.org/obo/MP_0011275

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• abnormal behavioral response to light
  http://purl.obolibrary.org/obo/MP_0011275

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 1699

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 1728

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 83.9564814814815

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 92.4146556798117

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 140.1

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 72.8125

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 3462df3c0b11cfd6d7d2c3a1e149d906

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.000302685652818597

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 53.25%, Male: -31.42%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 8.65961734766976

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 1.21720739342293

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.38613994956355e-12

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• JR31505

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.88457481949752

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.606648429224544

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 84.1664222957068

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 1.09946291396675

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 5.19850691904633e-05

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 46.9745942166367

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 14.3096434396393

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.00103932510626197

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 13.6348725886721
• -27.7228283362322

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 13.6348725886721
• -27.7228283362322

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0421130207455011

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - different direction for the sexes

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information