IMPC RDF data 統計解析結果（定量値）

undimensional_464446
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_464446

undimensional_464446(統計解析結果（定量値）)

URI表示モード

undimensional_464446

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_44388
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_42563
http://metadb.riken.jp/db/IMPC_RDF/Cohort/42563

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Jackson Laboratory
http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

JAX Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Sleep Wake
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/JAX_SLW_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Breath rate during sleep standard deviation
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/JAX_SLW_014_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/JR26292

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

JAX_SLW_014_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

abnormal sleep behavior
http://purl.obolibrary.org/obo/MP_0011396

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

abnormal sleep behavior
http://purl.obolibrary.org/obo/MP_0011396

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

abnormal sleep behavior
http://purl.obolibrary.org/obo/MP_0011396

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

902

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

930

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

0.781741935483871

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

0.808414634146342

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

0.81875

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

0.75875

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

f57b373aa5ea2f8eddc7d3df11540538

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0334954196514854

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 0.93%, Male: -9.85%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.0269239540264844

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.0037970921398494

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.96178483519968e-12

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.276362444291588

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

JR26292

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.75560073382707

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.00786126044759139

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.286280277921348

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

0.782176475793273

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.00384901144726407

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0339769088285519

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

0.00736963511914322

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.0314492466895287

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.81475420163018

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.0783133218287165
0.0308686304272242

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-0.0783133218287165
0.0308686304272242

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.011271339278053

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information