IMPC RDF data 統計解析結果（定量値）

undimensional_468872
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_468872

undimensional_468872(統計解析結果（定量値）)

URI表示モード

undimensional_468872

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_37887
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37887

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38034
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38034

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Medical Research Council centre for mouse genetics
http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 1
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Heart Weight/Tibia Length Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_708

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0140_5_D09

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_022_001_708

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

129

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

15

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

100

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

15

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

21.8842

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

27.0854263565891

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

19.528

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

22.238

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

d41d8cd98f00b204e9800998ecf8427e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

1.11833887214134e-13

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -13.63%, Male: -20.77%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

4.71867881984046

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.383448080176484

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.29379558763361e-26

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.0166255489508983

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0140_5_D09

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.117414447778722

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.852526662422221

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.019687002502285

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

22.2928224236088

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.319175387330641

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00431862429621943

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-3.31929604051211

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.517281214655516

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

8.94686754726926e-10

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-5.05873372329542
0.590614682056221

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-5.05873372329542
0.590614682056221

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

2.22352476499095e-15

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - different size as males greater

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information