undimensional_474488

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_474488

undimensional_474488

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48818
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_38007
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38007

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Medical Research Council centre for mouse genetics
  http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 2
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Haematology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_016_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Haemoglobin
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_016_001_003

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/HEPD0550_4_A06

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_016_001_003

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased hemoglobin content
  http://purl.obolibrary.org/obo/MP_0002874

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased hemoglobin content
  http://purl.obolibrary.org/obo/MP_0005564

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 279

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 12

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 172

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 10

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 15.1674418604651

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 15.305017921147

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 15.44

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 15.1166666666667

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 4ae00585bda5abff5d6f5f40c8962ed3

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0615442888520361

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 1.57%, Male: -1.3%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 0.136123320764531

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.0473660460789763

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 0.00426639436872653

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.00158524883624157

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• HEPD0550_4_A06

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.0163418731459

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.637398518021395

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.00163720372917885

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 15.1820666334386

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.0417755153586632

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0188533715044649

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 0.239572355938113

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.145993391383254

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.101570128528357

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -0.198278597326762
• 0.132167980143845

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• -0.198278597326762
• 0.132167980143845

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.134333742542378

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information