IMPC RDF data 統計解析結果（定量値）

undimensional_476269
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_476269

undimensional_476269(統計解析結果（定量値）)

URI表示モード

undimensional_476269

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_44388
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_41959
http://metadb.riken.jp/db/IMPC_RDF/Cohort/41959

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Jackson Laboratory
http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

JAX Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Electrocardiogram (ECG)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_ECG_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

HR
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_ECG_002_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/JR18631

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_ECG_002_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased heart rate
http://purl.obolibrary.org/obo/MP_0005333

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

1429

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

1462

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

728.889876880985

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

742.768369489153

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

717

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

732.571428571429

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

fa584a3426dfb6b6f9d154f32daa7e33

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.57368149407739

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-10.6061892530998

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

19.1623074119141

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.580360309535557

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -1.44%, Male: -1.44%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

14.0718802032744

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.3901381617181

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.1877455071198e-23

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

JR18631

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0633506622348909

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

1.20800758490317e-05

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

728.355963437177

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

1.19918173730355

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.969113709090749

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information