IMPC RDF data 統計解析結果（定量値）

undimensional_493616
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_493616

undimensional_493616(統計解析結果（定量値）)

URI表示モード

undimensional_493616

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_44388
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_44162
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44162

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Jackson Laboratory
http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

JAX Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Combined SHIRPA and Dysmorphology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CSD_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Locomotor activity
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CSD_032_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/JR30376

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CSD_032_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

hypoactivity
http://purl.obolibrary.org/obo/MP_0001402

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

1503

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

6

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

1507

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

4

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

16.4260119442601

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

15.7744510978044

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

17.25

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

17.1666666666667

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

ba6c7cda9f0d4ce7d9a676c2aef86e22

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.982476496890556

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-0.0647427461399804

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

2.96870786125982

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.982612186344812

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -0.4%, Male: -0.4%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-1.81394774928432

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.302545002086422

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

2.31921910958914e-09

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

0.321931564593854

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.0550467071833797

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

5.61113907536083e-09

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.0285430597909746

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

JR30376

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0441708274099643

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

6.41899326397372e-07

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.000384410998227053

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

10.9420761184766

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

1.01976401594045

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.948933670298099

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information