undimensional_502546

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_502546

undimensional_502546

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48008
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48008

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_48044
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48044

project

http://purl.org/dc/elements/1.1/contributor

• MGP
  http://metadb.riken.jp/db/IMPC_RDF/project/8

organization

http://purl.org/dc/elements/1.1/publisher

• Wellcome Trust Sanger Institute
  http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• MGP Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Clinical Chemistry
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_025_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Total protein
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_025_001_007

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0070_1_G07

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• M-G-P_025_001_007

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• decreased circulating total protein level
  http://purl.obolibrary.org/obo/MP_0005567

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased circulating total protein level
  http://purl.obolibrary.org/obo/MP_0005567

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased circulating total protein level
  http://purl.obolibrary.org/obo/MP_0005567

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 218

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 192

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 48.7911458333333

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 50.2380733944954

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 47.2142857142857

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 45.7428571428571

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 199215f15408a63d4943f4cfec4199fb

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.00021906021803476

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -2.66%, Male: -8.73%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 1.35930683177854

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.262146405882141

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 3.65091236737562e-07

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.794074955385798

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• EPD0070_1_G07

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.162071427586083

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.922598138742243

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.997569790596617

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 48.7023844784574

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.257824705546484

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0199476351905109

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -1.31587817080643

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 1.02406524095371

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.199655146872958

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 1.04940803652538
• -4.31586301919503

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 1.04940803652538
• -4.31586301919503

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 4.87606533362256e-05

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information