undimensional_518014

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_518014

undimensional_518014

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_47994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_46786
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/46786

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Institut Clinique de la Souris
  http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• ICS
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ICS_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Hematology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• White blood cell count
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_001_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/IP00006222a

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_HEM_001_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased leukocyte cell number
  http://purl.obolibrary.org/obo/MP_0000218

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased leukocyte cell number
  http://purl.obolibrary.org/obo/MP_0000221

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 249

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 260

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 4.93115384615385

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 6.61927710843374

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 3.66285714285714

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 6.94

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 0fc952f7a2ba246fa4bf5c34bf3dfa6d

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.121640348171935

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -14.94%, Male: 13.89%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 1.62051966320839

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.135065540729721

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 3.29114093162956e-29

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.782445425801797

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• IP00006222a

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.103634390443028

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.534102778802571

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.208600230466281

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 4.95094152902667

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.168668738869332

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0386054148427396

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -0.858455632319395

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.677717624325018

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.205877963319941

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.680273175350171
• 0.798167561615072

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.680273175350171
• 0.798167561615072

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.24125199934606

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information