IMPC RDF data 統計解析結果（定量値）

undimensional_518162
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_518162

undimensional_518162(統計解析結果（定量値）)

URI表示モード

undimensional_518162

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_38010
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38010

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38387
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38387

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

IPGTT
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_004_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_004_001_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0065_1_F10

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

M-G-P_004_001_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

increased body weight
http://purl.obolibrary.org/obo/MP_0001260

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

323

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

10

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

317

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

29.0369085173502

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

36.0939938080495

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

30.2714285714286

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

31.37

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

c5767ea809f44c7107924e680a6bc0d1

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.000179019450493598

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 5.25%, Male: -14.23%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

7.04691820608949

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.260000991563212

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.79058491466713e-105

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.226090005255621

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0065_1_F10

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.974896877307402

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0806934981816877

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.170000293078451

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

29.11993258079

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.253507774526714

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.000246735109959206

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

1.70821530747317

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

1.43836084098562

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.235467263901525

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-4.63406123222049
1.2537707113586

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-4.63406123222049
1.2537707113586

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.000239474204031126

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information