IMPC RDF data 統計解析結果（定量値）

undimensional_520125
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_520125

undimensional_520125(統計解析結果（定量値）)

URI表示モード

undimensional_520125

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_37978
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37978

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Institut Clinique de la Souris
http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 2
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Haematology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_016_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Mean cell volume
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_016_001_005

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0039_3_C02

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_016_001_005

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased mean corpuscular volume
http://purl.obolibrary.org/obo/MP_0002591

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased mean corpuscular volume
http://purl.obolibrary.org/obo/MP_0002591

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased mean corpuscular volume
http://purl.obolibrary.org/obo/MP_0002591

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

352

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

12

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

352

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

10

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

46.7727272727273

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

46.0076704545455

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

44.52

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

44.3333333333333

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

4a98c88f4d4488d0754c5592e9440160

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.00203682624110022

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -4.98%, Male: -3.73%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-0.762047497273408

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.057647764648143

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.29068989455456e-35

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

3.15879277949208e-07

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0039_3_C02

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.240824151344945

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.257803483168641

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

2.48749239152884e-06

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

46.8254356653916

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.155095760278258

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00130555533761378

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-2.30543566539164

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

1.09632841798664

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.0358495872152859

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

1.09516006114856
-1.73005483478489

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

1.09516006114856
-1.73005483478489

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.114641168346803

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information