IMPC RDF data 統計解析結果（定量値）

undimensional_520513
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_520513

undimensional_520513(統計解析結果（定量値）)

URI表示モード

undimensional_520513

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_37897
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37897

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38745
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38745

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

GMC Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/GMC_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Shirpa (GMC)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/GMC_923_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Trunk Curl
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/GMC_923_001_016

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/ABE1

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

GMC_923_001_016

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

trunk curl
http://purl.obolibrary.org/obo/MP_0001512

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

trunk curl
http://purl.obolibrary.org/obo/MP_0001512

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

trunk curl
http://purl.obolibrary.org/obo/MP_0001512

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

58

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

14

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

58

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

12

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

0.293103448275862

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

0.482758620689655

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

0.5

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

1

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

d41d8cd98f00b204e9800998ecf8427e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.00337892031421237

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 84.19%, Male: 2.27%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.167003224574045

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.312037284032991

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.605479271252017

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

ABE1

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

1.19063229924979e-05

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0368253257637849

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

0.333821812664568

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.233716249215388

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.018944896194355

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

0.385381322458737

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.108349334966672

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.000525696456722416

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.114707465577147
0.0103856713471877

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.114707465577147
0.0103856713471877

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.927998145050634

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information