IMPC RDF data 統計解析結果（定量値）

undimensional_521544
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_521544

undimensional_521544(統計解析結果（定量値）)

URI表示モード

undimensional_521544

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_39742
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39742

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Select Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/MGP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Total protein
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_006_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/DAET

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CBC_006_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

increased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005568

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

1952

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

1900

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

45.6297894736842

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

45.8748975409836

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

45.4428571428571

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

48.4571428571429

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

d307adf61223cf1c546130cb9f701bdd

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0441705116610285

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -0.4%, Male: 4.24%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-0.499825538999755

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.0808524205085701

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

7.05523545744032e-10

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

0.112660691414001

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.00935676812003859

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

9.47660804388023e-33

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

8.9770841024975e-05

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

DAET

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.737664150550444

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.871419785130705

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.00037484288750222

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

42.7676068507662

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.250108106664381

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.030872051676736

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-0.182327302667243

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.679625793086287

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.788502570168656

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.797489399304072
1.93902415743364

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.797489399304072
1.93902415743364

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.0150896995363304

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information