IMPC RDF data 統計解析結果（定量値）

undimensional_524017
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_524017

undimensional_524017(統計解析結果（定量値）)

URI表示モード

undimensional_524017

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48016
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48016

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_48089
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48089

project http://purl.org/dc/elements/1.1/contributor

MGP
http://metadb.riken.jp/db/IMPC_RDF/project/8

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

MGP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/M-G-P_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Hot Plate
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/M-G-P_012_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/M-G-P_012_001_005

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0079_5_E10

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

M-G-P_012_001_005

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

236

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

11

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

211

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

10

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

28.0791469194313

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

34.0970338983051

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

27.22

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

30.3909090909091

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

d41d8cd98f00b204e9800998ecf8427e

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.00157211990576951

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -2.96%, Male: -12.44%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

5.8629705664441

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.311628728415126

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

5.51297671992906e-57

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.00512306395642982

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0079_5_E10

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.931959707218207

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0224190958917053

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.0044699128818015

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

28.1039633109667

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.278106738826289

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0348343226304236

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-0.920692226511799

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

1.09191274343041

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.399626188557781

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-3.8739960589797
1.07769930051967

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

-3.8739960589797
1.07769930051967

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.000365442221629297

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information